Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919964.1_cds_XP_016469148.1_61716
CDS Infomation

[gene=LOC107791573] [db_xref=GeneID:107791573] [protein=pectate lyase-like] [protein_id=XP_016469148.1] [location=join(67000..67576,67652..67952,68044..68359)] [gbkey=CDS]
Sequence

ATGGACGCCTACAGAGCAAAAATTAGTGTATTTTTTCTCCTTGTGTTATTCACATTTGCT
GCATTAGCGACAGCAACAAACATCCCAAGAAGGCAACTTGGTAACAAGAAATACAAAGGC
CCATGCCGGGCCGAAAATGCAATCGACAAATGCTGGCGATGCGACCCAAATTGGGCCGAG
AATCGCCAGAAAATGGCCGATTGCGCATTGGGTTTTGGCAGCAATGCGATCGGAGGAAAG
TTGGGCAGAATCTACGTCGTCACAGACCCTTCTGACGACGATGTTGTCGATCCTAAGCCC
GGAACTCTCCGATATGGTGTTATCCAAAAGGAGCCATTGTGGATCATATTTGGCAAAAAC
ATGAAAATTAAACTTAGTAGGGAACTTATCGTGACTAGCAACAAAACAATCGACGGCCGT
GGATTTAATGTCCATATACAAAATGGAGCTGGCATTAAGATACAATGTGCATCCAATATT
ATTATTTCTAATCTCCGCATTCACAATATTGTACCCACCCCAGGTGGCCTGCTCAGGGAG
TCCGAGGACCACGTTGGCCTAAGGAGTGGCGATGAAGGTGATGGCATCAGCATCTTCGAT
TCGCGTGATATATGGATCGACCACATCTCTATGTCTCGTGCAACCGATGGTCTTATCGAT
GCTGTTGCTGCTTCCACTAACATTACCATATCCAATTGCCACTTCACTGACCACGAAAAG
GTAATGTTGTTCGGCGCCAACGATAATTACGTGCTTGACAAGGACATGAAAATTACATTA
GCGTACAACCACTTTGGAAAGAGGTTGGATCAAAGGATGCCTAGATGCAGGTTTGGATTT
TTCCATCTGGTGAACAATGACTACACTCATTGGGAAAGGTACGCTATTGGGGGAAGCAGT
GGAGCCACCATCATTAGTCAGGGTAATCGATTTATTGCTGAGGACGAATTGTTGGTGAAA
GAGGTAACATATAGGGAAAAACTTACGGCGAGTGTGGCGGAATGGATGAAATGGACATGG
ATATCAGATGGTGATGATATGGAAAATGGTGCGACATTTACACCATCTGGTGACCAGAAT
TTACTCGATAAAATTGACCATCTCAATCTCATTAAACCAGAACCTTCTTCCAAAGTTGGA
ATTCTTACTAAGTTTTCAGGTGCTCTGTCTTGCGTCAAAGGACGCCCATGCTAA

Peptide Sequence

PEP ID

XP_016469148.1
PEP Infomation

PREDICTED: pectate lyase-like [Nicotiana tabacum]
Sequence

MDAYRAKISVFFLLVLFTFAALATATNIPRRQLGNKKYKGPCRAENAIDKCWRCDPNWAE
NRQKMADCALGFGSNAIGGKLGRIYVVTDPSDDDVVDPKPGTLRYGVIQKEPLWIIFGKN
MKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQCASNIIISNLRIHNIVPTPGGLLRE
SEDHVGLRSGDEGDGISIFDSRDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEK
VMLFGANDNYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSS
GATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQN
LLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC

Transcript Sequence

Gene sequence data has not been registered.